PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G21380.1   Mannose-binding lectin superfamily protein

Lab Annot. Mannose-binding lectin protein
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52040.1 11Arabidopsis thaliana9E-140462496771 (58)_
AT1G52030.2 11Arabidopsis thaliana3E-12348546619 (9)_
AT1G52030.1 11Arabidopsis thaliana3E-12348546619 (9)_
Os05g43240.2 7Oryza sativa8E-1932830450 (0)_
Os05g43240.1 7Oryza sativa9E-1932830450 (0)_
Os05g43240.3 7Oryza sativa9E-1933530450 (0)_
Zm00001eb369990_P001 agpv5Zea mays2E-2234027450 (0)_
AC218998.2_FGP007 3.21Zea mays6E-1747226420 (0)_
v1_AC218998.2_FGP007 4a53Zea mays6E-1747226420 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Jacalin(3)
TargetP: Cytoplasm (Class 2 C0.074; M0.149; S0.127; _0.891)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 460 aa (-cTP 457)
Molecular Weight 49.72 kDA(-cTP )
PI 6.03(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2252Detail       seedlings [A. thaliana] total tissue gfs9
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18436743(specific to seeds)
19334764(plasma membrane (cell culture))
20702726(mature seeds)
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help