PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G21230.1 4-coumarate:CoA ligase 5

Lab Annot.

At4CL5 - 4-coumarate--CoA ligase
Mapman: 16.2.1.3 secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G21230.3 11 Arabidopsis thaliana 0 543 98 98 0 (0) _
AT3G21230.2 11 Arabidopsis thaliana 0 497 100 100 0 (0) _
AT3G21230.4 11 Arabidopsis thaliana 0 426 100 100 0 (0) _
Os02g08100.1 7 Oryza sativa 0 539 57 76 20 (20) _
Os08g34790.1 7 Oryza sativa 0 540 58 75 0 (0) _
Os06g44620.1 7 Oryza sativa 0 541 57 74 10 (10) _
Zm00001eb187910_P002 agpv5 Zea mays 0 548 56 72 0 (0) S
v1_GRMZM2G054013_P03 4a53 Zea mays 0 548 56 72 0 (0) S
GRMZM2G054013_P02 3.21 Zea mays 0 548 56 72 17 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AMP-binding(1) AMP-binding_C(1) Cadherin_5(1) HTH_55(2)
TargetP:	Cytoplasm (Class 2 C0.060; M0.143; S0.087; _0.925)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	570 aa (-cTP 555)
Molecular Weight	62.56 kDA(-cTP )
PI	5.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data