PPDB

 The Plant Proteome Database

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AT3G21215.1   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21215.2 11Arabidopsis thaliana03391001000 (0)C
AT3G21215.4 11Arabidopsis thaliana03391001000 (0)C
AT3G21215.3 11Arabidopsis thaliana03071001000 (0)C
Os08g15080.1 7Oryza sativa8E-12926772847 (7)C
Os06g47300.1 7Oryza sativa1E-3826933510 (0)C
Os06g05800.2 7Oryza sativa4E-3026630470 (0)_
v1_GRMZM2G165137_P01 4a53Zea mays9E-13226371828 (8)C
Zm00001eb170900_P001 agpv5Zea mays9E-13226371820 (0)C
GRMZM2G165137_P01 3.21Zea mays9E-13226371826 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PHM7_cyt(3) RRM_1(2) RRM_7(2) RRM_occluded(2)
TargetP: Chloroplast (Class 4 C0.510; M0.245; S0.017; _0.283)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 339 aa (-cTP 313)
Molecular Weight 36.98 kDA(-cTP 34.39)
PI 7.29(-cTP 7.24)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help