PPDB

 The Plant Proteome Database

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AT3G21055.1   photosystem II subunit T
Lab Annot. psbTn-1 - lTP
Mapman: 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits
Curated Location thylakoid-integral (Pubmed: 23198870 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21055.2 11Arabidopsis thaliana1E-691031001000 (0)_
AT1G51400.1 11Arabidopsis thaliana2E-39106708233 (33)C
Os02g37060.1 7Oryza sativa7E-082972828 (8)C
v1_GRMZM2G377168_P01 4a53Zea mays1E-0710540508 (8)C
Zm00001eb245320_P001 agpv5Zea mays1E-0710540500 (0)C
GRMZM2G377168_P01 3.21Zea mays1E-07105405010 (10)C

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Chloroplast (Class 1 C0.955; M0.066; S0.051; _0.016)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 103 aa (-cTP 34)
Molecular Weight 11.03 kDA(-cTP 3.83)
PI 9.55(-cTP 8.74)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1333Detail       leaf [A. thaliana] total tissue - Low-mass range wild-type
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1335Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1336Detail       leaf [A. thaliana] total tissue - low mass region t1-t2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1354Detail       leaf [A. thaliana] total tissue wild-type
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1420Detail        [A. thaliana]  
1495Detail       leaf [A. thaliana] wild-type
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1556Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1574Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1575Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1596Detail        [A. thaliana]  
1643Detail       leaf [A. thaliana] total leaf tissue Wild-type
1708Detail        [A. thaliana] Wild-type
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
1870Detail       Total leaf [A. thaliana] Stroma wild-type
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2317Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 19995723(chloroplast reference proteome)

Comparative Proteomics Data

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