PPDB

The Plant Proteome Database

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AT3G21000.1   Gag-Pol-related retrotransposon family protein

Lab Annot. Gag-Pol-related retrotransposon protein
Mapman: 29.5.4.1.4* protein.degradation.aspartate protease.AA.A11A
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G20980.1 11Arabidopsis thaliana5E-3011354710 (0)_
Os07g05280.1 7Oryza sativa2E-2745823440 (0)_
Os03g61660.1 7Oryza sativa2E-2745023440 (0)_
Os03g26290.1 7Oryza sativa2E-2535026490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4219(2) Retrotran_gag_2(1)
TargetP: Cytoplasm (Class 2 C0.026; M0.137; S0.069; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 405 aa (-cTP 398)
Molecular Weight 46.32 kDA(-cTP )
PI 5.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help