PPDB

 The Plant Proteome Database

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AT3G20740.1   Transducin/WD40 repeat-like superfamily protein
Lab Annot. Transducin/WD40 repeat-like protein
Mapman: 27.3.65 RNA.regulation of transcription.Polycomb Group (PcG)
Curated Location
TAIR curated location: polar nucleus10962025
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G79990.2 11Arabidopsis thaliana3E-1117630461 (1)M
AT1G79990.5 10Arabidopsis thaliana3E-11176304657 (35)M
AT1G79990.1 11Arabidopsis thaliana3E-11176304667 (45)M
Os08g04270.2 7Oryza sativa036269820 (0)_
Os08g04270.1 7Oryza sativa036269820 (0)_
Os08g04270.3 7Oryza sativa036269820 (0)_
Zm00001eb416950_P001 agpv5Zea mays036369820 (0)_
GRMZM2G148924_P05 3.21Zea mays034868820 (0)_
v1_GRMZM2G148924_P05 4a53Zea mays034868825 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC4_WD40(3) Ge1_WD40(3) Nup160(2) WD40(6)
TargetP: Cytoplasm (Class 3 C0.265; M0.051; S0.080; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 369 aa (-cTP 317)
Molecular Weight 41.26 kDA(-cTP )
PI 5.85(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help