PPDB

The Plant Proteome Database

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AT3G20730.1   PPR superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12770.1 11Arabidopsis thaliana3E-10453834540 (0)_
AT2G27610.1 11Arabidopsis thaliana2E-10255334563 (3)M
AT5G39350.1 11Arabidopsis thaliana2E-10253934550 (0)M
Os04g53630.1 7Oryza sativa5E-13555440600 (0)M
Os06g08650.1 7Oryza sativa7E-10352733570 (0)C
Os01g25270.1 7Oryza sativa6E-10253034560 (0)M
GRMZM2G000674_P01 3.21Zea mays4E-14155340610 (0)M
Zm00001eb279350_P001 agpv5Zea mays4E-14155340610 (0)M
v1_GRMZM2G000674_P01 4a53Zea mays4E-14155340610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AEP1(3) PPR(13) PPR_1(13) PPR_2(11) PPR_3(8) PPR_long(4) RNPP_C(3) RPN7(5) TPR_1
TargetP: Secreted (Class 4 C0.003; M0.532; S0.782; _0.198)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 565 aa (-cTP 541)
Molecular Weight 63.11 kDA(-cTP )
PI 8.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help