PPDB

The Plant Proteome Database

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AT3G20670.1   histone H2A 13

Lab Annot. histone (HTA13)
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G51060.1 11Arabidopsis thaliana2E-85132939658 (58)M
AT5G54640.1 11Arabidopsis thaliana9E-84130949658 (58)M
AT4G27230.1 11Arabidopsis thaliana2E-83131929658 (58)M
Os08g33100.1 7Oryza sativa6E-7411991946 (6)M
Os07g36140.1 7Oryza sativa4E-73119909426 (26)M
Os12g25120.1 7Oryza sativa9E-69117899311 (11)M
v1_GRMZM2G151726_P03 4a53Zea mays4E-741199195130 (130)M
GRMZM2G151726_P03 3.21Zea mays4E-741199195121 (121)M
Zm00001eb106460_P001 agpv5Zea mays4E-7411991950 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(1) Histone(1) Histone_H2A_C(1)
TargetP: Mitochondria (Class 5 C0.254; M0.371; S0.012; _0.127)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 132 aa (-cTP 88)
Molecular Weight 13.85 kDA(-cTP )
PI 10.16(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1621Detail        [A. thaliana] m48
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18814325(cotyledons)
20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help