PPDB

The Plant Proteome Database

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AT3G20660.1   organic cation/carnitine transporter4

Lab Annot. organic cation transporter family
Mapman: 34.14 transport.unspecified cations
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G73220.1 11Arabidopsis thaliana1E-9553235531 (1)_
AT1G16390.1 11Arabidopsis thaliana5E-9052534510 (0)_
AT1G79360.1 11Arabidopsis thaliana1E-8852133510 (0)_
Os04g53930.1 7Oryza sativa1E-16238762770 (0)_
Os04g53930.2 7Oryza sativa2E-14235361760 (0)M
Os07g37510.1 7Oryza sativa3E-8451834510 (0)_
Zm00001eb069630_P001 agpv5Zea mays051359710 (0)_
GRMZM2G121070_P01 3.21Zea mays051359710 (0)_
v1_GRMZM2G121070_P01 4a53Zea mays051359710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1304(2) DUF373(2) EpuA(3) MFS_1(2) Sugar_tr(1)
TargetP: Cytoplasm (Class 2 C0.103; M0.110; S0.048; _0.881)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 12 TMs
TAT position:
Length 526 aa (-cTP 503)
Molecular Weight 57.50 kDA(-cTP )
PI 5.83(-cTP )

Experimental Evidence

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View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
39Detail       leaf [A. thaliana] plastid thylakoid membranewild-type
101Detail       leaf [A. thaliana] plastid thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

14729914(thylakoid stripped)

Comparative Proteomics Data


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