PPDB

The Plant Proteome Database

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AT3G20550.1   SMAD/FHA domain-containing protein

Lab Annot. SMAD/FHA domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G24410.1 11Arabidopsis thaliana1E-296675810 (0)_
AT5G38840.1 11Arabidopsis thaliana1E-1512533561 (1)C
Os05g46780.1 7Oryza sativa6E-9719071830 (0)C
Os05g46860.1 7Oryza sativa2E-569981900 (0)_
Os05g46780.2 7Oryza sativa2E-248558740 (0)C
GRMZM2G113156_P01 3.21Zea mays5E-10122266780 (0)C
v1_GRMZM2G113156_P01 4a53Zea mays5E-10122266784 (4)C
Zm00001eb286040_P003 agpv5Zea mays5E-10122266780 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FHA(1) Yop-YscD_cpl(1)
TargetP: Chloroplast (Class 5 C0.516; M0.156; S0.016; _0.383)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 314 aa (-cTP 297)
Molecular Weight 36.95 kDA(-cTP 34.99)
PI 9.45(-cTP 8.83)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1548Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1551Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1552Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1553Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1556Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1574Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1575Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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