PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G20260.1   DUF1666 family protein (DUF1666)

Lab Annot.
Mapman: 29.2.1.2.2.34 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G73850.1 11Arabidopsis thaliana8E-4235835500 (0)S
AT1G73850.2 11Arabidopsis thaliana8E-4235835500 (0)S
AT5G39785.1 11Arabidopsis thaliana6E-3734931480 (0)_
Os08g40820.2 7Oryza sativa2E-11639653650 (0)_
Os08g40820.1 7Oryza sativa2E-11639653650 (0)_
Os08g40820.3 7Oryza sativa3E-6925353660 (0)_
Zm00001eb035720_P002 agpv5Zea mays4E-12438854680 (0)_
Zm00001eb035720_P001 agpv5Zea mays4E-12438854680 (0)_
Zm00001eb174650_P001 agpv5Zea mays2E-11845948630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1666(2)
TargetP: Cytoplasm (Class 3 C0.088; M0.324; S0.055; _0.777)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 437 aa (-cTP 411)
Molecular Weight 50.51 kDA(-cTP )
PI 5.55(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1653Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help