PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G20015.1   Eukaryotic aspartyl protease family protein

Lab Annot. aspartic protease
Mapman: 29.5.4.1.1* protein.degradation.aspartate protease.AA.A1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18490.1 11Arabidopsis thaliana1E-1344954462322 (142)C
AT1G25510.1 11Arabidopsis thaliana4E-12542545650 (0)S
AT1G01300.1 11Arabidopsis thaliana6E-119418476535 (27)S
Os04g58070.1 7Oryza sativa7E-14741654660 (0)S
Os01g04710.1 7Oryza sativa2E-12343049630 (0)M
Os01g41550.1 7Oryza sativa4E-10945845591 (1)S
Zm00001eb066250_P001 agpv5Zea mays3E-17041360720 (0)S
v1_GRMZM2G149996_P01 4a53Zea mays3E-17041360720 (0)S
GRMZM2G149996_P01 3.21Zea mays3E-17041360720 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Asp(1) TAXi_C(1) TAXi_N(1)
TargetP: Secreted (Class 2 C0.058; M0.036; S0.845; _0.041)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 470 aa (-cTP 388)
Molecular Weight 50.54 kDA(-cTP )
PI 6.82(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help