PPDB

PPDB	The Plant Proteome Database

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AT3G19950.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G19950.2 11 Arabidopsis thaliana 0 328 100 100 0 (0) _
AT3G19950.3 11 Arabidopsis thaliana 0 328 100 100 0 (0) _
AT1G55530.3 11 Arabidopsis thaliana 2E-47 279 35 50 0 (0) _
Os06g01200.1 7 Oryza sativa 5E-68 352 42 53 3 (3) _
Os10g34590.1 7 Oryza sativa 1E-64 347 40 53 5 (5) M
Os03g22830.2 7 Oryza sativa 5E-44 292 35 48 0 (0) M
v1_GRMZM2G157855_P01 4a53 Zea mays 1E-72 364 40 53 1 (1) S
GRMZM2G157855_P01 3.21 Zea mays 1E-72 364 40 53 0 (0) S
Zm00001eb045300_P001 agpv5 Zea mays 1E-72 364 40 53 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) DZR(2) Elf1(1) FANCL_C(1) PHD(2) Prok-RING_1(3) Prok-RING_4(2) Ra
TargetP:	Cytoplasm (Class 3 C0.228; M0.077; S0.139; _0.679)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	328 aa (-cTP 318)
Molecular Weight	35.71 kDA(-cTP )
PI	4.35(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data