PPDB

The Plant Proteome Database

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AT3G19895.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12940.1 11Arabidopsis thaliana5E-4333636500 (0)_
AT3G12940.2 11Arabidopsis thaliana6E-4333636500 (0)_
AT5G05230.1 11Arabidopsis thaliana5E-3917040650 (0)_
Os02g58280.1 7Oryza sativa4E-16953950650 (0)M
Os03g60140.1 7Oryza sativa6E-4116943670 (0)C
Os07g31440.2 7Oryza sativa2E-3735532470 (0)_
Zm00001eb259400_P001 agpv5Zea mays1E-18050252700 (0)M
v1_GRMZM2G145482_P01 4a53Zea mays1E-18050252700 (0)M
GRMZM2G145482_P01 3.21Zea mays1E-18050252700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 4 C0.577; M0.098; S0.045; _0.241)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 554 aa (-cTP 511) (-lTP 472)
Molecular Weight 59.69 kDA(-cTP 55.33)(-lTP 51.25)
PI 8.37(-cTP 8.22)(-lTP 8.226)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21472856(mitochondrial-2DEgels-uncurated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help