PPDB

PPDB	The Plant Proteome Database

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AT3G19670.1 pre-mRNA-processing protein 40B

Lab Annot.

pre-mRNA-processing protein 40B
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G19670.2 11 Arabidopsis thaliana 0 992 100 100 0 (0) _
AT3G19670.3 11 Arabidopsis thaliana 0 992 100 100 0 (0) _
AT3G19670.4 11 Arabidopsis thaliana 0 992 98 98 0 (0) _
Os01g34780.1 7 Oryza sativa 1E-86 274 52 75 9 (9) _
Os01g34780.2 7 Oryza sativa 1E-86 274 52 75 9 (9) _
Os10g34380.1 7 Oryza sativa 3E-25 801 24 40 12 (12) _
Zm00001eb162920_P005 agpv5 Zea mays 0 1040 39 58 0 (0) C
Zm00001eb162920_P001 agpv5 Zea mays 0 1040 39 58 0 (0) C
Zm00001eb162920_P003 agpv5 Zea mays 0 1040 39 58 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FF(8) Glyco_hyd_101C(2) WW(2)
TargetP:	Cytoplasm (Class 4 C0.297; M0.190; S0.010; _0.569)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	992 aa (-cTP 921)
Molecular Weight	113.57 kDA(-cTP )
PI	6.46(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data