PPDB

 The Plant Proteome Database

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AT3G19630.1   Radical SAM superfamily protein
Lab Annot. Radical SAM protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G60230.1 11Arabidopsis thaliana3E-5835236530 (0)C
AT2G39670.2 11Arabidopsis thaliana4E-552444363122 (62)C
AT2G39670.1 11Arabidopsis thaliana4E-552444363125 (63)C
Os03g10520.1 7Oryza sativa036669830 (0)C
Os01g45370.1 7Oryza sativa1E-6035437550 (0)M
Os01g74190.1 7Oryza sativa1E-5930040595 (5)M
v1_GRMZM2G119104_P01 4a53Zea mays036870820 (0)C
Zm00001eb007700_P004 agpv5Zea mays036870820 (0)C
GRMZM2G119104_P01 3.21Zea mays036870820 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Fer4_12(1) Fer4_14(1) Radical_SAM(1)
TargetP: Cytoplasm (Class 2 C0.047; M0.051; S0.082; _0.813)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 372 aa (-cTP 279)
Molecular Weight 41.18 kDA(-cTP )
PI 8.87(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help