PPDB

 The Plant Proteome Database

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AT3G19490.1   sodium:hydrogen antiporter 1
Lab Annot. sodium:proton antiporter (NHD1) (coupled to BASS2- Na-dependent pyruvate plastid importer)
Mapman: 34.12 transport.metal
Curated Location envelope-inner (Pubmed: 24617758 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G49810.1 11Arabidopsis thaliana041980890 (0)S
Os09g02214.1 7Oryza sativa049681914 (4)C
Os09g02214.2 7Oryza sativa045983924 (4)C
Os09g02214.3 7Oryza sativa040682912 (2)C
Zm00001eb307330_P002 agpv5Zea mays050280910 (0)C
GRMZM2G053927_P02 3.21Zea mays050280911 (1)C
Zm00001eb307330_P001 agpv5Zea mays046481910 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CitMHS(2)
TargetP: Chloroplast (Class 1 C0.947; M0.064; S0.004; _0.038)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 8 TMs
Aramemnon: 13 TMs
TAT position:
Length 576 aa (-cTP 537)
Molecular Weight 61.37 kDA(-cTP 57.16)
PI 5.50(-cTP 5.05)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1621Detail        [A. thaliana] m48
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1628Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1830Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1831Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Normal light
1832Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2271Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))

Comparative Proteomics Data

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