PPDB

 The Plant Proteome Database

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AT3G19400.1   Cysteine proteinases superfamily protein
Lab Annot. papain-like cysteine protease with inhibitor domain (RDL2)
Mapman: 29.5.3.1.1* protein.degradation.cysteine protease.CA.C1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G19400.2 11Arabidopsis thaliana028010010011 (2)S
AT3G19390.1 11Arabidopsis thaliana0349748514 (3)S
AT3G43960.1 11Arabidopsis thaliana8E-14734363750 (0)S
Os04g57440.1 7Oryza sativa1E-132319617511 (11)S
Os04g57490.1 7Oryza sativa3E-12334455700 (0)S
Os11g14900.4 7Oryza sativa1E-11034350640 (0)S
GRMZM2G073465_P03 3.21Zea mays7E-1413195977134 (56)S
Zm00001eb432170_P001 agpv5Zea mays7E-14131959770 (0)S
v1_GRMZM2G166281_P01 4a53Zea mays5E-140319587764 (64)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Inhibitor_I29(1) Peptidase_C1(1) Peptidase_C1_2(2)
TargetP: Secreted (Class 1 C0.023; M0.014; S0.992; _0.017)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 362 aa (-cTP 321)
Molecular Weight 40.29 kDA(-cTP )
PI 4.77(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help