PPDB

PPDB	The Plant Proteome Database

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AT3G19390.1 Granulin repeat cysteine protease family protein

Lab Annot.

papain-like cysteine protease (RD21C) / thiol protease
Mapman: 29.5.3.1.1* protein.degradation.cysteine protease.CA.C1

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G43060.1 11 Arabidopsis thaliana 0 430 64 77 99 (59) S
AT1G47128.1 11 Arabidopsis thaliana 0 446 60 73 811 (456) S
AT3G19400.1 11 Arabidopsis thaliana 0 349 74 85 11 (2) S
Os04g57440.1 7 Oryza sativa 3E-174 418 60 74 11 (11) S
Os04g57490.1 7 Oryza sativa 1E-156 413 57 70 0 (0) S
Os05g43230.1 7 Oryza sativa 2E-133 397 53 64 0 (0) S
GRMZM2G073465_P03 3.21 Zea mays 0 415 64 77 70 (56) S
Zm00001eb432170_P001 agpv5 Zea mays 0 415 64 77 0 (0) S
v1_GRMZM2G166281_P01 4a53 Zea mays 0 412 60 76 64 (64) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Granulin(2) Inhibitor_I29(1) Peptidase_C1(1) Peptidase_C1_2(2)
TargetP:	Secreted (Class 1 C0.039; M0.009; S0.993; _0.013)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	452 aa (-cTP 424)
Molecular Weight	49.31 kDA(-cTP )
PI	5.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2302	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19874541(ABI1 interacting proteins)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data