PPDB

The Plant Proteome Database

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AT3G19160.1   ATP/ADP isopentenyltransferase

Lab Annot. IPT8 -adenylate isopentenyltransferase
Mapman: 17.4.1 hormone metabolism.cytokinin.synthesis-degradation
Curated Location plastid (Pubmed: 23198870 14726522 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68460.1 11Arabidopsis thaliana1E-12531159740 (0)C
AT4G24650.1 11Arabidopsis thaliana7E-10929654700 (0)_
AT1G25410.1 11Arabidopsis thaliana2E-10835148640 (0)C
Os05g24660.1 7Oryza sativa1E-6626143610 (0)_
Os05g47840.1 7Oryza sativa2E-6629641570 (0)M
Os03g59570.1 7Oryza sativa1E-6130740570 (0)C
Zm00001eb095250_P001 agpv5Zea mays1E-6828743610 (0)C
GRMZM2G018046_P01 3.21Zea mays1E-6828743610 (0)C
v1_GRMZM2G018046_P01 4a53Zea mays1E-6828743610 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_25(1) AAA_29(1) AAA_33(2) AAA_7(1) ABC_tran(1) IPPT(2) IPT(1) PhoH(1) RNA_he
TargetP: Chloroplast (Class 2 C0.876; M0.048; S0.065; _0.105)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 330 aa (-cTP 295)
Molecular Weight 37.32 kDA(-cTP 33.49)
PI 8.18(-cTP 6.61)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help