PPDB

The Plant Proteome Database

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AT3G19120.1   PIF / Ping-Pong family of plant transposase

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G12010.1 11Arabidopsis thaliana4E-25332254648 (48)_
AT4G29780.1 11Arabidopsis thaliana3E-2134324430 (0)_
AT3G55350.1 11Arabidopsis thaliana3E-1929427430 (0)_
Os05g51520.1 7Oryza sativa1E-2235826430 (0)_
Os07g07880.1 7Oryza sativa2E-1925627460 (0)_
Os01g62160.1 7Oryza sativa2E-1927128430 (0)M
GRMZM2G037015_P01 3.21Zea mays1E-2233926440 (0)_
v1_GRMZM2G037015_P01 4a53Zea mays1E-2233926443 (3)_
GRMZM2G129291_P01 3.21Zea mays7E-2029925430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DDE_Tnp_4(1) Plant_tran(1) UstYa(1)
TargetP: Chloroplast (Class 2 C0.822; M0.009; S0.010; _0.128)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 446 aa (-cTP 379) (-lTP 358)
Molecular Weight 49.42 kDA(-cTP 42.34)(-lTP 40.34)
PI 8.32(-cTP 8.66)(-lTP 8.889)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help