PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G19000.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot.
Mapman: 21.2 redox.ascorbate and glutathione
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G19000.2 11Arabidopsis thaliana02691001000 (0)_
AT3G19010.1 11Arabidopsis thaliana3E-170352617864 (30)_
AT3G19010.4 11Arabidopsis thaliana3E-17035261780 (0)_
Os03g42130.1 7Oryza sativa5E-12735353670 (0)_
Os08g15149.1 7Oryza sativa1E-8834942540 (0)_
Os04g49194.1 7Oryza sativa2E-6333535510 (0)_
v1_GRMZM2G060940_P01 4a53Zea mays2E-13535253690 (0)_
GRMZM2G060940_P02 3.21Zea mays2E-13535253690 (0)_
Zm00001eb219040_P003 agpv5Zea mays2E-13535253690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(2) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.179; M0.095; S0.108; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 352 aa (-cTP 270)
Molecular Weight 40.66 kDA(-cTP )
PI 5.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help