PPDB

PPDB	The Plant Proteome Database

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AT3G18970.1 mitochondrial editing factor 20

Lab Annot.

PPR, Mitochondrial editing factor 20 - edits rps4
Mapman: 27.1.5* RNA.processing.editing

Curated Location

mitochondria (Pubmed: 20566637 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G59200.1 11 Arabidopsis thaliana 2E-83 489 35 51 0 (0) C
AT1G74630.1 11 Arabidopsis thaliana 4E-82 526 35 49 0 (0) S
AT1G74630.2 11 Arabidopsis thaliana 5E-82 526 35 49 0 (0) S
Os03g58100.1 7 Oryza sativa 4E-78 457 36 54 0 (0) C
Os07g05560.1 7 Oryza sativa 6E-78 464 35 53 0 (0) M
Os03g60690.1 7 Oryza sativa 7E-78 406 36 56 0 (0) C
GRMZM2G481373_P01 3.21 Zea mays 2E-88 367 41 60 0 (0) C
v1_GRMZM2G481373_P01 4a53 Zea mays 2E-88 367 41 60 0 (0) C
Zm00001eb424980_P001 agpv5 Zea mays 2E-88 367 41 60 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(7) PPR_1(7) PPR_2(8) PPR_3(5) PPR_long(2) Ribosomal_L12_N(3)
TargetP:	Mitochondria (Class 5 C0.085; M0.316; S0.034; _0.159)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	472 aa (-cTP 389)
Molecular Weight	52.56 kDA(-cTP )
PI	9.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data