PPDB

PPDB	The Plant Proteome Database

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AT3G18930.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G18930.3 11 Arabidopsis thaliana 0 411 100 100 0 (0) _
AT3G18930.2 11 Arabidopsis thaliana 0 411 100 100 0 (0) _
AT3G03550.1 11 Arabidopsis thaliana 3E-22 281 29 46 0 (0) _
Os12g40460.1 7 Oryza sativa 3E-28 169 44 58 0 (0) M
Os01g61470.1 7 Oryza sativa 6E-22 143 39 53 0 (0) _
Os02g46600.1 7 Oryza sativa 6E-20 177 36 52 0 (0) _
Zm00001eb030780_P001 agpv5 Zea mays 1E-49 410 39 49 0 (0) M
GRMZM2G124423_P01 3.21 Zea mays 1E-49 410 39 49 0 (0) M
v1_GRMZM2G124423_P01 4a53 Zea mays 1E-49 410 39 49 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) HemY_N(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H
TargetP:	Cytoplasm (Class 5 C0.367; M0.080; S0.004; _0.478)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	411 aa (-cTP 402)
Molecular Weight	46.66 kDA(-cTP )
PI	9.80(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(trichomes)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data