PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G18870.1   Mitochondrial transcription termination factor family protein

Lab Annot. mTERF domain protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location plastid (Pubmed: 23198870 21464319 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34620.1 11Arabidopsis thaliana1E-45209416315 (12)C
AT2G03050.2 11Arabidopsis thaliana2E-4023937570 (0)M
AT2G03050.1 11Arabidopsis thaliana3E-4023937570 (0)M
Os03g57149.1 7Oryza sativa2E-3920537576 (6)C
Os03g24590.1 7Oryza sativa7E-3520737550 (0)M
Os08g40430.1 7Oryza sativa6E-2120233520 (0)_
v1_GRMZM2G168665_P01 4a53Zea mays9E-2819737543 (3)C
GRMZM2G168665_P01 3.21Zea mays9E-2819737549 (9)C
Zm00001eb017630_P001 agpv5Zea mays2E-2719737540 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: mTERF(2) Pex14_N(2)
TargetP: Chloroplast (Class 1 C0.974; M0.045; S0.009; _0.040)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 274 aa (-cTP 220) (-lTP 157)
Molecular Weight 31.43 kDA(-cTP 25.47)(-lTP 18.73)
PI 9.67(-cTP 9.43)(-lTP 9.894)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help