PPDB

The Plant Proteome Database

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AT3G18760.1   Translation elongation factor EF1B/ribosomal protein S6 family protein

Lab Annot. Translation elongation factor EF1B/ribosomal protein S6 protein
Mapman: 29.2.1.1.3.1.6 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18760.2 11Arabidopsis thaliana5E-9313996962 (1)_
Os01g12090.1 7Oryza sativa7E-236159812 (2)_
Zm00001eb119770_P001 agpv5Zea mays2E-4510264780 (0)_
Zm00001eb119770_P002 agpv5Zea mays2E-4510264780 (0)_
GRMZM2G026868_P01 3.21Zea mays9E-154468790 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_S6(1)
TargetP: Cytoplasm (Class 3 C0.053; M0.104; S0.237; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 71)
Molecular Weight 15.97 kDA(-cTP )
PI 8.97(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2237Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help