PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G18700.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G13210.1 11Arabidopsis thaliana6E-196473780 (0)M
AT3G25610.1 11Arabidopsis thaliana1E-177660720 (0)M
AT1G68710.1 11Arabidopsis thaliana3E-157557700 (0)M
Os06g29380.1 7Oryza sativa2E-116453700 (0)M
Os05g01030.1 7Oryza sativa1E-105855700 (0)M
Os08g29150.1 7Oryza sativa3E-076448620 (0)C
Zm00001eb267720_P001 agpv5Zea mays6E-136454700 (0)_
GRMZM2G324462_P01 3.21Zea mays6E-126454710 (0)M
v1_GRMZM2G324462_P01 4a53Zea mays6E-126454710 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PhoLip_ATPase_C(1)
TargetP: Secreted (Class 2 C0.018; M0.194; S0.825; _0.149)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 174 aa (-cTP 165)
Molecular Weight 19.88 kDA(-cTP )
PI 8.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17272265(ubiquinated proteins (suspension cells))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help