PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G18620.1   DHHC-type zinc finger family protein

Lab Annot.
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G04270.1 11Arabidopsis thaliana2E-129537510 (0)S
AT3G09320.1 11Arabidopsis thaliana4E-1215829460 (0)S
AT4G22750.2 10Arabidopsis thaliana4E-127145640 (0)S
Os06g20400.1 7Oryza sativa8E-12433654680 (0)_
Os06g20400.5 7Oryza sativa8E-12433654680 (0)_
Os04g57819.2 7Oryza sativa1E-9426753690 (0)S
Zm00001eb433550_P001 agpv5Zea mays8E-12333354680 (0)_
v1_GRMZM2G092571_P02 4a53Zea mays8E-12333354680 (0)_
v1_GRMZM2G092571_P03 4a53Zea mays8E-12333354680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: C1_1(2) DHHC(2) DZR(2)
TargetP: Cytoplasm (Class 1 C0.048; M0.077; S0.086; _0.924)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 5 TMs
TAT position:
Length 345 aa (-cTP 265)
Molecular Weight 37.86 kDA(-cTP )
PI 8.80(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help