PPDB

 The Plant Proteome Database

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AT3G18500.1   DNAse I-like superfamily protein
Lab Annot. DNAse I-like superprotein
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18500.2 11Arabidopsis thaliana0448959511 (1)M
AT3G18500.3 11Arabidopsis thaliana0449949411 (1)M
AT3G18500.4 11Arabidopsis thaliana044894940 (0)M
Os06g15410.1 7Oryza sativa2E-5027939570 (0)C
Os01g42490.1 7Oryza sativa1E-4824739560 (0)M
Os01g42490.3 7Oryza sativa3E-4019139580 (0)_
v1_GRMZM2G148811_P01 4a53Zea mays3E-10238944610 (0)C
GRMZM2G148811_P01 3.21Zea mays3E-10238944610 (0)C
GRMZM2G034430_P01 3.21Zea mays2E-9237042560 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Exo_endo_phos(1)
TargetP: Mitochondria (Class 4 C0.275; M0.640; S0.001; _0.064)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 426 aa (-cTP 339)
Molecular Weight 47.76 kDA(-cTP )
PI 8.60(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help