PPDB

The Plant Proteome Database

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AT3G18270.1   cytochrome P450%2C family 77%2C subfamily A%2C polypeptide 5 pseudogene

Lab Annot. CYP77A5P (cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene); catalytic
Mapman: 26.1 misc.misc2
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68890.2 11Arabidopsis thaliana5E-0642124420 (0)_
AT1G68890.1 11Arabidopsis thaliana5E-0642124428 (3)C
Os01g04630.1 7Oryza sativa4E-175421597319 (19)C
Zm00001eb124820_P002 agpv5Zea mays1E-17438761770 (0)M
v1_GRMZM2G169152_P03 4a53Zea mays5E-17438761772 (2)M
GRMZM2G169152_P03 3.21Zea mays5E-174387617719 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Enolase_C(1) MAAL_C(1) MR_MLE_C(1) MR_MLE_N(1)
TargetP: Chloroplast (Class 1 C0.916; M0.009; S0.058; _0.082)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 410 aa (-cTP 340)
Molecular Weight 44.66 kDA(-cTP 36.97)
PI 5.91(-cTP 5.32)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
871Detail       leaf [A. thaliana] chloroplast stromawild-type
2114Detail       leaf [A. thaliana] Stroma stromawt
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
20423899(chloroplast)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help