PPDB

PPDB	The Plant Proteome Database

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AT3G18090.1 nuclear RNA polymerase D2B

Lab Annot.

Mapman: 27.2 RNA.transcription

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G23780.1 11 Arabidopsis thaliana 0 1052 95 97 0 (0) _
AT3G23780.2 11 Arabidopsis thaliana 0 1052 95 97 0 (0) _
AT3G18090.2 11 Arabidopsis thaliana 0 892 99 99 0 (0) _
Os04g54840.1 7 Oryza sativa 0 1094 57 73 0 (0) _
Os08g07480.1 7 Oryza sativa 0 1076 55 72 0 (0) _
Os03g28960.2 6 Oryza sativa 5E-106 969 29 48 0 (0) _
GRMZM2G133512_P01 3.21 Zea mays 0 1077 54 71 0 (0) _
v1_GRMZM2G133512_P01 4a53 Zea mays 0 1077 54 71 0 (0) _
Zm00001eb415030_P002 agpv5 Zea mays 0 1070 53 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2002(2) DUF4483(1) RNA_pol_Rpb2_1(1) RNA_pol_Rpb2_2(1) RNA_pol_Rpb2_3(1) RNA_
TargetP:	Cytoplasm (Class 5 C0.041; M0.464; S0.094; _0.569)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	1055 aa (-cTP 1040)
Molecular Weight	118.97 kDA(-cTP )
PI	8.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)

Comparative Proteomics Data