PPDB

PPDB	The Plant Proteome Database

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AT3G18035.1 winged-helix DNA-binding transcription factor family protein

Lab Annot.

HON4; DNA binding
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G18035.2 11 Arabidopsis thaliana 0 369 98 99 0 (0) _
AT1G48620.1 11 Arabidopsis thaliana 1E-117 531 51 59 42 (38) C
AT1G14900.1 11 Arabidopsis thaliana 1E-10 132 33 50 0 (0) _
Os05g51850.2 7 Oryza sativa 2E-18 384 32 43 1 (1) _
Os05g51850.1 7 Oryza sativa 4E-17 406 30 42 1 (1) _
Os05g51850.3 7 Oryza sativa 2E-13 399 29 41 1 (1) _
GRMZM2G106133_P02 3.21 Zea mays 4E-16 206 33 42 45 (45) _
Zm00001eb041850_P001 agpv5 Zea mays 4E-16 206 33 42 0 (0) _
v1_GRMZM2G106133_P02 4a53 Zea mays 4E-16 206 33 42 49 (49) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Linker_histone(2) Stork_head(1) Trypan_PARP(2)
TargetP:	Cytoplasm (Class 4 C0.385; M0.111; S0.026; _0.727)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	480 aa (-cTP 407)
Molecular Weight	51.52 kDA(-cTP )
PI	9.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1582	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data