PPDB

The Plant Proteome Database

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AT3G18020.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G62670.1 11Arabidopsis thaliana3E-5850726480 (0)M
AT1G62670.2 11Arabidopsis thaliana3E-5850726480 (0)M
AT1G62930.1 11Arabidopsis thaliana1E-5751926488 (0)M
Os07g47720.1 7Oryza sativa5E-15961544610 (0)_
Os01g63400.1 7Oryza sativa1E-5453726470 (0)_
Os01g63400.2 7Oryza sativa1E-5453726470 (0)_
Zm00001eb111370_P002 agpv5Zea mays7E-16361043600 (0)_
v1_GRMZM2G312434_P01 4a53Zea mays7E-16361043601 (1)_
GRMZM2G312434_P01 3.21Zea mays7E-16361043600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATP13(3) HSR(1) MRP-S27(4) Mtf2(2) PPR(16) PPR_1(15) PPR_2(13) PPR_3(8) PPR_long
TargetP: Mitochondria (Class 2 C0.014; M0.804; S0.051; _0.111)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 688 aa (-cTP 662)
Molecular Weight 77.97 kDA(-cTP )
PI 6.91(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help