PPDB

PPDB	The Plant Proteome Database

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AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III

Lab Annot.

TPR protein (homology to Toc64V)
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

envelope-outer (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G17970.2 11 Arabidopsis thaliana 0 540 100 100 0 (0) S
AT5G09420.1 11 Arabidopsis thaliana 0 594 51 67 0 (0) C
AT1G08980.1 11 Arabidopsis thaliana 9E-136 419 47 67 157 (75) _
Os03g50010.1 7 Oryza sativa 0 587 59 75 17 (17) M
Os02g51810.1 7 Oryza sativa 0 593 47 64 0 (0) _
Os02g51810.2 7 Oryza sativa 2E-132 486 44 61 0 (0) _
Zm00001eb054500_P003 agpv5 Zea mays 0 590 58 73 0 (0) M
Zm00001eb054500_P002 agpv5 Zea mays 0 590 57 72 0 (0) M
v1_GRMZM2G159542_P01 4a53 Zea mays 0 597 47 63 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Amidase(1) DUF2225(1) TPR_1(3) TPR_11(3) TPR_12(2) TPR_14(2) TPR_16(2) TPR_17(2)
TargetP:	Secreted (Class 5 C0.018; M0.344; S0.372; _0.154)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	589 aa (-cTP 525)
Molecular Weight	64.02 kDA(-cTP )
PI	8.62(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1568	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data