PPDB

The Plant Proteome Database

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AT3G17950.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17950.3 11Arabidopsis thaliana2E-1311801001000 (0)C
AT3G17950.2 11Arabidopsis thaliana1E-1251721001000 (0)C
Os02g50050.1 7Oryza sativa3E-1120132390 (0)_
Os06g14530.1 7Oryza sativa2E-1023131380 (0)_
Zm00001eb190230_P001 agpv5Zea mays4E-1022028360 (0)C
v1_GRMZM2G063426_P01 4a53Zea mays4E-1022028360 (0)C
GRMZM2G063426_P01 3.21Zea mays4E-1022028360 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lenti_VIF_2(1)
TargetP: Chloroplast (Class 4 C0.895; M0.008; S0.001; _0.575)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 211 aa (-cTP 143) (-lTP 146)
Molecular Weight 22.90 kDA(-cTP 15.59)(-lTP 15.94)
PI 6.31(-cTP 5.96)(-lTP 6.321)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help