PPDB

The Plant Proteome Database

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AT3G17940.1   Galactose mutarotase-like superfamily protein

Lab Annot. aldose 1-epimerase protein
Mapman: 3.5 minor CHO metabolism.others
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G47800.1 11Arabidopsis thaliana3E-114332526595 (52)S
AT5G15140.1 11Arabidopsis thaliana2E-11033049662 (2)S
AT3G01260.1 11Arabidopsis thaliana3E-6433637550 (0)S
Os10g06720.1 7Oryza sativa034171820 (0)C
Os10g06720.2 7Oryza sativa2E-16730274840 (0)_
Os03g26430.1 7Oryza sativa2E-10433846650 (0)S
Zm00001eb064300_P002 agpv5Zea mays6E-18033271820 (0)_
GRMZM5G898915_P01 3.21Zea mays6E-18033271820 (0)_
v1_AC155417.2_FGP009 4a53Zea mays4E-17435567770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aldose_epim(1) Flg_new(2)
TargetP: Cytoplasm (Class 2 C0.213; M0.055; S0.097; _0.882)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 341 aa (-cTP 271)
Molecular Weight 37.20 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16242667(mature Pollen)
15815986(Silique)
15815986(seedling)
15815986(Leaf)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
19508356(mature pollen grains and pollen tubes)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help