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AT3G17930.1
transmembrane protein
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| Lab Annot. |
DAC - ctb6f assembly factor
Mapman: 29.8 protein.protein assembly and cofactor ligation |
| Curated Location |
thylakoid (Pubmed: 23198870 19224954 23043079 )
TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
DUF3007(1) |
| TargetP: |
Chloroplast (Class 4 C0.530; M0.158; S0.035; _0.092) |
| Predotar: |
|
| Subcel. Location: |
Transmembrane |
| TM-HMM prediction: |
2 TMs |
| Aramemnon: |
2 TMs |
| TAT position: |
|
| Length |
190 aa (-cTP 140) |
| Molecular Weight |
20.91 kDA(-cTP 15.47) |
| PI |
6.64(-cTP 4.91) |
|
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 46 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 105 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 876 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1401 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1403 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1432 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1933 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast | wild-type |
| 1934 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast | wild-type |
| 1983 | Detail | | | | | | | | leaf [A. thaliana] | plastid | wild-type |
| 1984 | Detail | | | | | | | | leaf [A. thaliana] | plastid | wild-type |
| 1985 | Detail | | | | | | | | leaf [A. thaliana] | plastid | wild-type |
| 1986 | Detail | | | | | | | | leaf [A. thaliana] | plastid | Prep1_Prep2 |
| 1988 | Detail | | | | | | | | leaf [A. thaliana] | plastid | Prep1_Prep2 |
| 2009 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2015 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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14729914(thylakoid stripped)
15322131(Thylakoid-stripped)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19995723(chloroplast reference proteome)
21515685(GreenCut2)
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Comparative Proteomics Data
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