PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G17880.2   tetraticopeptide domain-containing thioredoxin
Lab Annot. tetraticopeptide domain-containing thioredoxin
Mapman: 21.1 redox.thioredoxin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17880.1 11Arabidopsis thaliana0380989866 (2)_
AT4G22670.1 11Arabidopsis thaliana7E-1032726076260 (110)_
AT3G51030.1 11Arabidopsis thaliana4E-2910842700 (0)_
Os09g23650.1 7Oryza sativa8E-13533959752 (2)_
Os02g01030.2 7Oryza sativa6E-100277577424 (24)_
Os02g01030.4 7Oryza sativa1E-9927857736 (6)_
Zm00001eb210150_P001 agpv5Zea mays8E-9328055720 (0)_
v1_GRMZM2G134806_P01 4a53Zea mays2E-92280557222 (22)_
GRMZM2G134806_P01 3.21Zea mays3E-92280557248 (30)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AhpC-TSA(2) DUF4407(1) HemY_N(2) HipN(1) MAS20(1) OST3_OST6(1) PCB_OB(1) Thiored
TargetP: Cytoplasm (Class 4 C0.112; M0.223; S0.136; _0.601)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 373 aa (-cTP 370)
Molecular Weight 41.91 kDA(-cTP )
PI 5.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19376835(leaf phosphoproteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help