PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G17880.1   tetraticopeptide domain-containing thioredoxin

Lab Annot. tetraticopeptide domain-containing thioredoxin
Mapman: 21.1 redox.thioredoxin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17880.2 11Arabidopsis thaliana0380989857 (2)_
AT4G22670.1 11Arabidopsis thaliana2E-1022776075236 (110)_
AT3G51030.1 11Arabidopsis thaliana4E-2910842700 (0)_
Os09g23650.1 7Oryza sativa1E-13433959752 (2)_
Os02g01030.4 7Oryza sativa4E-9928456726 (6)_
Os02g01030.2 7Oryza sativa5E-99283577224 (24)_
Zm00001eb210150_P001 agpv5Zea mays7E-9228056730 (0)_
v1_GRMZM2G134806_P01 4a53Zea mays2E-91280567322 (22)_
GRMZM2G134806_P01 3.21Zea mays2E-91278567348 (30)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AhpC-TSA(2) DUF4407(1) HemY_N(2) HipN(1) MAS20(1) OST3_OST6(1) PCB_OB(1) Thiored
TargetP: Cytoplasm (Class 4 C0.111; M0.238; S0.170; _0.579)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 380 aa (-cTP 377)
Molecular Weight 42.85 kDA(-cTP )
PI 5.50(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help