PPDB

The Plant Proteome Database

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AT3G17760.1   glutamate decarboxylase 5

Lab Annot. glutamate decarboxylase, putative
Mapman: 13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17760.2 11Arabidopsis thaliana04941001001 (1)_
AT2G02010.2 11Arabidopsis thaliana049876870 (0)C
AT2G02010.1 11Arabidopsis thaliana049876875 (3)_
Os08g36320.2 7Oryza sativa049775870 (0)_
Os08g36320.3 7Oryza sativa049775860 (0)_
Os03g51080.1 7Oryza sativa049875850 (0)C
Zm00001eb037690_P002 agpv5Zea mays049174850 (0)_
GRMZM2G017110_P02 3.21Zea mays049174854 (3)_
v1_GRMZM2G017110_P02 4a53Zea mays049174851 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aminotran_5(1) DUF4255(1) Pyridoxal_deC(1)
TargetP: Cytoplasm (Class 2 C0.160; M0.120; S0.150; _0.783)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 494 aa (-cTP 491)
Molecular Weight 55.77 kDA(-cTP )
PI 5.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
2274Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help