PPDB

 The Plant Proteome Database

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AT3G17690.1   cyclic nucleotide gated channel 19
Lab Annot.
Mapman: 34.22 transport.cyclic nucleotide or calcium regulated channels
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17690.2 11Arabidopsis thaliana064299990 (0)C
AT3G17700.1 11Arabidopsis thaliana072675820 (0)C
AT3G17690.3 11Arabidopsis thaliana051699990 (0)C
Os02g53340.1 7Oryza sativa073654660 (0)_
Os02g53340.2 7Oryza sativa073654660 (0)_
Os06g10580.2 7Oryza sativa072252660 (0)_
Zm00001eb256480_P001 agpv5Zea mays072455680 (0)_
GRMZM2G141642_P01 3.21Zea mays2E-14738662750 (0)M
Zm00001eb256480_P002 agpv5Zea mays3E-12934864760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ion_trans(1)
TargetP: Chloroplast (Class 3 C0.678; M0.200; S0.006; _0.122)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 729 aa (-cTP 681)
Molecular Weight 84.05 kDA(-cTP 78.71)
PI 9.96(-cTP 9.84)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help