PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G17620.1   F-box and associated interaction domains-containing protein
Lab Annot. F-box and associated interaction domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G16740.1 11Arabidopsis thaliana7E-14239653700 (0)_
AT3G17320.1 11Arabidopsis thaliana2E-12541449650 (0)_
AT3G24580.1 11Arabidopsis thaliana7E-12438551680 (0)_
Os09g27570.1 7Oryza sativa2E-1034625400 (0)_
Os10g41650.1 7Oryza sativa6E-0930822400 (0)M
Os05g23810.1 7Oryza sativa2E-0619227400 (0)_
GRMZM2G049364_P02 3.21Zea mays3E-0825225400 (0)_
GRMZM2G049364_P03 3.21Zea mays3E-0825225400 (0)_
GRMZM2G049364_P01 3.21Zea mays3E-0825225400 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: F-box(1) F-box-like(1) FBA_1(2) Vif(2)
TargetP: Cytoplasm (Class 2 C0.193; M0.085; S0.008; _0.793)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 398 aa (-cTP 380)
Molecular Weight 46.45 kDA(-cTP )
PI 8.24(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help