PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G17609.1   HY5-homolog

Lab Annot. homolog of HY5 (HYH)
Mapman: 27.3.35 RNA.regulation of transcription.bZIP transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17609.4 11Arabidopsis thaliana6E-9313599990 (0)C
AT3G17609.2 11Arabidopsis thaliana1E-9114990900 (0)_
AT3G17609.3 11Arabidopsis thaliana3E-791141001000 (0)_
Os02g10860.1 7Oryza sativa2E-267466820 (0)C
Os01g07880.1 7Oryza sativa6E-227460810 (0)C
Os06g39960.1 7Oryza sativa3E-176867850 (0)_
Zm00001eb235510_P002 agpv5Zea mays8E-257462810 (0)_
v1_GRMZM2G137046_P01 4a53Zea mays9E-257462810 (0)C
Zm00001eb235510_P001 agpv5Zea mays9E-257462810 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: bZIP_1(1) bZIP_2(1) bZIP_Maf(1) CENP-F_leu_zip(1) Cep57_CLD_2(1) DivIC(1) DUF440
TargetP: Chloroplast (Class 3 C0.697; M0.199; S0.012; _0.108)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 135 aa (-cTP 105)
Molecular Weight 15.25 kDA(-cTP 12.18)
PI 10.06(-cTP 9.81)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help