PPDB

The Plant Proteome Database

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AT3G17460.1   PHD finger family protein

Lab Annot. PHD finger protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09520.1 11Arabidopsis thaliana7E-1417331440 (0)C
v1_GRMZM2G170099_P01 4a53Zea mays9E-0917826410 (0)_
GRMZM2G170099_P01 3.21Zea mays9E-0917826410 (0)_
Zm00001eb129830_P001 agpv5Zea mays1E-0817826410 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PHD(2) Prok-RING_1(2) zf-CHY(2)
TargetP: Cytoplasm (Class 2 C0.055; M0.141; S0.007; _0.905)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 198 aa (-cTP 115)
Molecular Weight 21.64 kDA(-cTP )
PI 9.10(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help