PPDB

PPDB	The Plant Proteome Database

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AT3G17205.1 ubiquitin protein ligase 6

Lab Annot.

ubiquitin protein ligase 6 (UPL6)
Mapman: 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G17205.3 11 Arabidopsis thaliana 0 1029 100 100 2 (0) _
AT3G17205.2 11 Arabidopsis thaliana 0 1029 98 98 2 (0) _
AT3G53090.1 11 Arabidopsis thaliana 4E-106 539 36 57 0 (0) _
Os05g06690.1 7 Oryza sativa 0 1035 60 74 0 (0) _
Os05g06690.2 7 Oryza sativa 0 1035 60 74 0 (0) _
Os05g06690.3 7 Oryza sativa 0 933 58 73 0 (0) _
v1_GRMZM2G034622_P01 4a53 Zea mays 0 309 81 92 0 (0) _
Zm00001eb412620_P003 agpv5 Zea mays 0 1034 59 75 0 (0) _
Zm00001eb412620_P002 agpv5 Zea mays 0 1034 59 75 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HECT(1) IQ(1)
TargetP:	Cytoplasm (Class 4 C0.363; M0.247; S0.010; _0.691)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1029 aa (-cTP 1017)
Molecular Weight	117.66 kDA(-cTP )
PI	6.38(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data