PPDB

The Plant Proteome Database

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AT3G17100.1   sequence-specific DNA binding transcription factor

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17100.2 11Arabidopsis thaliana1E-1632301001000 (0)C
AT3G06590.1 11Arabidopsis thaliana3E-5317456750 (0)C
AT3G06590.4 11Arabidopsis thaliana3E-5317456750 (0)C
Os03g19780.1 7Oryza sativa6E-2918941570 (0)_
Os01g14110.1 7Oryza sativa2E-1817037480 (0)M
Os07g48900.1 7Oryza sativa5E-1815544580 (0)C
GRMZM2G112428_P01 3.21Zea mays2E-2818742610 (0)_
GRMZM5G851485_P01 3.21Zea mays2E-2716543630 (0)_
Zm00001eb014980_P001 agpv5Zea mays2E-2216535550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SufE(2)
TargetP: Chloroplast (Class 2 C0.978; M0.008; S0.002; _0.270)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 230 aa (-cTP 195) (-lTP 130)
Molecular Weight 25.31 kDA(-cTP 21.41)(-lTP 14.23)
PI 11.60(-cTP 11.50)(-lTP 11.740)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help