PPDB

The Plant Proteome Database

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AT3G17060.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19730.1 11Arabidopsis thaliana1E-8029342600 (0)S
AT2G36710.1 11Arabidopsis thaliana1E-7730540610 (0)S
AT2G21610.1 11Arabidopsis thaliana2E-7429341590 (0)S
Os03g19610.1 7Oryza sativa1E-12430856720 (0)M
Os01g53990.1 7Oryza sativa2E-7930339610 (0)S
Os05g44600.1 7Oryza sativa2E-7733338570 (0)S
Zm00001eb163010_P001 agpv5Zea mays3E-11830853690 (0)S
GRMZM2G004927_P01 3.21Zea mays3E-11830853692 (2)S
v1_GRMZM2G004927_P01 4a53Zea mays3E-11830853691 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectinesterase(1)
TargetP: Secreted (Class 3 C0.004; M0.242; S0.838; _0.118)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 344 aa (-cTP 320)
Molecular Weight 38.81 kDA(-cTP )
PI 8.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help