PPDB

PPDB	The Plant Proteome Database

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AT3G16890.1 pentatricopeptide (PPR) domain protein 40

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G16890.2 11 Arabidopsis thaliana 0 530 100 100 0 (0) _
AT5G39710.1 11 Arabidopsis thaliana 6E-67 522 29 48 0 (0) M
AT1G62670.1 11 Arabidopsis thaliana 3E-63 531 25 43 0 (0) M
Os12g37100.1 7 Oryza sativa 0 616 46 67 0 (0) M
Os12g05640.1 7 Oryza sativa 2E-61 486 29 49 0 (0) C
Os03g40020.1 7 Oryza sativa 2E-60 566 26 47 6 (6) C
v1_GRMZM2G420723_P01 4a53 Zea mays 0 586 46 67 0 (0) M
GRMZM2G420723_P01 3.21 Zea mays 0 586 46 67 0 (0) M
Zm00001eb028360_P004 agpv5 Zea mays 0 586 46 67 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(3) DUF3368(3) DUF3718(2) ECSIT(3) MRP-S27(5) Mtf2(2) PPR(12) PPR_1(11)
TargetP:	Chloroplast (Class 2 C0.814; M0.184; S0.024; _0.041)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	659 aa (-cTP 608)
Molecular Weight	74.26 kDA(-cTP 69.02)
PI	9.15(-cTP 8.87)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21311031(lysine-acetylated leaf)

Comparative Proteomics Data