PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G16860.1   COBRA-like protein 8 precursor

Lab Annot. COBRA-like protein 8 precursor (COBL8)
Mapman: 15 metal handling
Curated Location
TAIR curated location: anchored to membrane0012376623,12068095,12805593
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16120.1 11Arabidopsis thaliana063174861 (1)S
AT5G49270.1 11Arabidopsis thaliana062161770 (0)S
AT4G27110.1 11Arabidopsis thaliana063148650 (0)S
Os03g18910.1 7Oryza sativa061551680 (0)S
Os06g47110.1 7Oryza sativa060549680 (0)S
Os07g49080.1 7Oryza sativa061546650 (0)S
v1_GRMZM2G353276_P01 4a53Zea mays063149650 (0)S
GRMZM2G353276_P01 3.21Zea mays063149650 (0)S
v1_GRMZM2G377215_P01 4a53Zea mays063551670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBM_2(3) COBRA(2)
TargetP: Secreted (Class 4 C0.072; M0.304; S0.618; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 653 aa (-cTP 607)
Molecular Weight 72.02 kDA(-cTP )
PI 8.80(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help