PPDB

The Plant Proteome Database

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AT3G16840.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot. DEAD box RNA helicase (RH13)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G16840.2 11Arabidopsis thaliana082799990 (0)_
AT5G60990.1 11Arabidopsis thaliana3E-6148331511 (1)_
AT2G33730.1 11Arabidopsis thaliana7E-52530304623 (4)_
Os04g43140.1 7Oryza sativa063159750 (0)C
Os03g50090.3 7Oryza sativa6E-5343432501 (1)_
Os03g50090.1 7Oryza sativa6E-5343432501 (1)_
GRMZM2G059365_P01 3.21Zea mays078852700 (0)C
Zm00001eb077380_P001 agpv5Zea mays078852700 (0)C
v1_GRMZM2G407748_P01 4a53Zea mays070855729 (9)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_22(1) DEAD(1) Helicase_C(3) UTP25(2) YL1(1)
TargetP: Cytoplasm (Class 3 C0.229; M0.124; S0.054; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 826 aa (-cTP 823)
Molecular Weight 93.99 kDA(-cTP )
PI 8.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help